WebPlantCARE is a database of plant cis-acting regulatory elements, enhancers and repressors. Besides the transcription motifs found on a sequence, it also offers a link to the EMBL … http://plantpan2.itps.ncku.edu.tw/

Full article: Function analysis and stress-mediated cis-element ...

WebJul 11, 2003 · We discuss the detection of cis-acting regulatory elements using word-counting or probabilistic methods (so-called “search by signal” methods) and the delineation of promoters by considering both sequence content and structural features (“search by content” methods). WebAfter a cis-acting element analysis of the 2000 bp upstream region of forty-seven CsWRKY genes by the PlantCARE, 14 common cis-acting elements were mainly predicted (Supplementary Table S2), as well an evolutionary tree was constructed based on the full-length sequences of CsWRKY TFs . Including the W-box binding site, seven regulatory … jordan stern us bancorp

PlantPAN 3.0 - NCKU

Web51 3.1.4 PlantCARE PlantCARE is database of plant specific cis-Acting regulatory elements in the promoter regions (Lescot et al., 2002). It generates a sequ ence analysis output on a dynamic webpage, on which TF binding sites are highlighted in the input sequence. WebPlant gene promoters contain a variety of important cis -acting elements that are involved in regulating the expression of corresponding downstream genes at the transcriptional level, thereby enabling plants to resist environmental stresses. 1, 2 Generally, the regions of a gene or gene family that code for a kind of protein in different species … WebDatabase of regulatory factors (transcription factor, histone, and other DNA-binding protein) and binding site ... It is not only efficient to investigate critical cis-and trans-regulatory elements in plant promoters, but also reconstruct high-confidence relationships of TF-targets under a specific condition. Confidently, the PlantPAN 3.0 will ... how to invest in kospi